Riding the wave of dolphin research
Pitt engineers team up with the University of Houston to make changes in the pharmaceutical industry
Yes, dolphins can get kidney stones, too. And they may be the key to changing how we treat human illnesses.
Kidney stones in dolphins are made of ammonium urate crystals, which are rarely found in humans. A recent publication in Nature Communications from the University of Houston developed a way to control the growth of the crystals by manipulating isomers of urate, called tautomers. Coauthor Giannis Mpourmpakis, Bicentennial Alumni Faculty fellow and associate professor of chemical and petroleum engineering at the University of Pittsburgh Swanson School of Engineering, performed computational chemistry calculations to predict the percentage of all possible urate tautomers under different experimental conditions.
“Our calculations revealed the competition of minor tautomers that are responsible for suppressing crystal growth and altering the properties of crystals,” Mpourmpakis explained. “We also predicted how different tautomers respond to absorbing light and aided their experimental identification. Studies like these can benefit the pharmaceutical industry.”
This work is a continuation of the research efforts of the Mpourmpakis Lab, or the Computer-Aided Nano & Energy Lab (CANELa), over the past decade to understand material synthesis and control their properties. The lab was recognized with the CAREER award from the National Science Foundation in 2017.
Written by Laurie Fickman, republished with permission
During Dolphin Research, UH Engineer Discovers New Method to Possibly Improve Pharmaceuticals
In the body, crystals – made of things such as calcium or a collection of urine – form masses that can cause pain and serious health conditions. A University of Houston crystals expert, Jeffrey Rimer, Abraham E. Dukler Professor of Chemical Engineering, known globally for his seminal breakthroughs using innovative methods to control crystals to help treat malaria and kidney stones, is reporting a new method to control the growth of ammonium urate crystals, the substance known to cause kidney stones in dolphins.
Yes, dolphins get kidney stones, too. And how did we find this out? You can thank the Navy.
In fact, move over Navy SEAL – the bottlenose dolphin is another marine mammal working hard defending our shores. With their highly evolved ability to detect objects, the dolphins have been helping the U.S. Navy find underwater mines for decades as part of the U.S. Navy Marine Mammal Program.
As part of that program, the Navy takes good care of its dolphin friends, funding research on such matters as dolphin kidney stones. Rimer has been riding the wave of dolphin research for a while, previously reporting on crystals associated with dolphin kidney stones made of ammonium urate, rarely found in humans. Now he’s leading an international team of researchers from Tianjin University China, Stockholm University Sweden, University of Pittsburgh, University of Strathclyde, Glasgow Scotland, Texas A&M University, Purdue University, Instituto Politecnico Nacional Mexico and The Molecular Foundry at Lawrence Berkeley National Laboratory.
On behalf of the team, Rimer has published new work in Nature Communications on their discovery of a method to control the crystal growth of ammonium urate by manipulating isomers of urate called tautomers. The findings may not only help dolphins but may also have implications for the pharmaceutical industry.
“We found that a small fraction of urate existing as a minor tautomer can control the rate at which crystals grow to the point they can completely block crystallization,” said Rimer. “It was the most unexpected and remarkable thing to find that as you increase the concentration of urate, all of a sudden the rate of crystallization drops to almost zero and crystals do not grow in that region.”
Rimer thinks it may be possible to mimic those results by diet control to get the concentration in the kidney in that range, so then the possibility exists that crystal growth would be inhibited, and medicine would be unnecessary.
That goes for dolphins and humans, alike, but more on that in future research.
Examining urate crystals, Rimer also found that tautomers get incorporated into crystals as defects, and that is where the findings have implications for pharmaceuticals.
Among the top 200 drugs, there are 33 (including allopurinol, used to treat kidney stones) that are tautomers. These medications impact millions worldwide, prescribed for HIV, epilepsy, COVID-19, schizophrenia and cancer (skin, lung and pancreatic).
“When we produced crystals with very few defects, they dissolved much slower whereas crystals with a higher percentage of defects dissolve faster,” said Rimer. “That is critical for pharmaceuticals because when you put medicine into your body, their effectiveness is related to how fast they dissolve,” said Rimer.
“We are asking the question about these 33 pharmaceuticals – do companies really know the extent to which they develop defects? The same question can be posed for nature where tautomers may impact unique properties in species that are vital to their intended function like optical properties in fish or color change in chameleons,” he said.
With Rimer’s continued research, these questions may soon be answered.